Bioinformatics, R, and more
Differential Expression Analysis: edgeR vs limma
Perform differential expression analysis and visualise differentially expressed genes in R.
Comparing HGNC Symbol Mappings by 3 Different Databases
Mapping from Entrez gene IDs to HGNC gene symbols for genes in GSE152641 using biomaRt, BridgeDbR, and org.Hs.eg.db.
GEO DataSets: Experiment Selection and Initial Processing
A walkthrough of processing bulk RNA-seq data from the GEO database purely in R.
Setting Up R for Bioinformatics Workflows
A Windows user oriented guide to the initial set-up for R.
Setting up my distill blog
Starting my learning journal of bioinformatics.